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aavs1 tre3g egfp  (Addgene inc)


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    Structured Review

    Addgene inc aavs1 tre3g egfp
    Aavs1 Tre3g Egfp, supplied by Addgene inc, used in various techniques. Bioz Stars score: 93/100, based on 36 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/aavs1+tre3g+egfp/AAVS1-TRE3G-EGFP+(Plasmid+%2352343)/pm41886980-12-63-70
    Average 93 stars, based on 36 article reviews
    aavs1 tre3g egfp - by Bioz Stars, 2026-09
    93/100 stars

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    Related Articles

    Transfection:

    Article Title: Drosophila MIC10b can polymerize into cristae-shaping filaments
    Article Snippet: .. Cells were transfected with AAVS1-TRE3G-MIC10-FLAG-T2A-EGFP ( , EMBOJ), AAVS1-TRE3G-DmMIC10-FLAG-T2A-EGFP, or AAVS1-TRE3G-EGFP ( ) (52343; Addgene). ..

    Article Title: Drosophila MIC10b can polymerize into cristae-shaping filaments.
    Article Snippet: .. Cells were transfected with AAVS1-TRE3GMIC10-FLAG-T2A-EGFP (Stephan et al, 2020, EMBOJ), AAVS1-TRE3GDmMIC10-FLAG-T2A-EGFP, or AAVS1-TRE3G-EGFP (Qian et al, 2014) (52343; Addgene). ..

    Plasmid Preparation:

    Article Title: Splice modulators target PMS1 to reduce somatic expansion of the Huntington’s disease-associated CAG repeat
    Article Snippet: .. The AAVS1-TRE3G-EGFP (Addgene plasmid # 52343) plasmid was modified to insert the HTT exon 1 coding sequence using SalI restriction sites. ..

    Article Title: Generation and characterization of a human induced pluripotent stem cell line (hiPSC) expressing the rEstus voltage sensor under doxycycline induction.
    Article Snippet: .. Date archived/stock creation date 20.01.2025, p9 Cell line repository/bank https://hpscreg.eu/cell-line/UK Bi015-B-6 Ethics/GMO work approvals Ethics Committee, Medical Faculty, Rheinische Friedrich-WilhelmsUniversität (275/08) Disclaimers for Addgene/repositorysourced used recombinant DNA resources https://www.addgene.org/52341/, hAAVS1 TALEN Left was a gift from SuChun Zhang (Addgene plasmid # 52341; https://n2t.net/addgene:52341; RRID: Addgene_52341)https://www.addgene. org/52342/, hAAVS1 TALEN Right was a gift from Su-Chun Zhang (Addgene plasmid # 52342; https://n2t.net/addg ene:52342; RRID:Addgene_52342) https://www.addgene.org/52343/, AAVS1-TRE3G-EGFP was a gift from SuChun Zhang (Addgene plasmid # 52343; https://n2t.net/addgene:52343; RRID: Addgene_52343)https://www.addgene. org/209767/ rEstus (Addgene plasmid # 209767; https://n2t.net/addgene :209767; RRID:Addgene_209767) 1. ..

    Article Title: SYNGAP1 deficiency disrupts synaptic neoteny in xenotransplanted human cortical neurons in vivo.
    Article Snippet: pLenti-TRE3G-GCaMP7b-WPRE: The TRE3G fragment (pLenti CMVTRE3G eGFP Puro (w819-1) was a gift from Eric Campeau (Addgene plasmid # 27570; http://n2t.net/addgene:27570; RRID:Addgene_27570)) and the GCaMP7b fragment (pGP-AAV-synjGCaMP7b-WPRE was a gift from Douglas Kim & GENIE Project (Addgene plasmid # 104489; http://n2t.net/addgene:104489; RRID:Addgene_104489)) was transferred to lentiviral backbone by restriction enzyme digestion and ligation. pLenti-hSynI-TetON3G-WPRE: The DNA fragment of TetON3Gwas amplified from AAVS1-TRE3G-EGFP was a gift from Su-Chun Zhang (Addgene plasmid # 52343; http://n2t.net/addgene:52343; RRID:Addgene_52343) using following primers pair: 50-GTCGA Catgtctagactggacaagag-3’/50-ACGCGTttacccggggagcatgtcaa-3’. .. pLenti-TRE3G-GCaMP7b-WPRE: The TRE3G fragment (pLenti CMVTRE3G eGFP Puro (w819-1) was a gift from Eric Campeau (Addgene plasmid # 27570; http://n2t.net/addgene:27570; RRID:Addgene_27570)) and the GCaMP7b fragment (pGP-AAV-synjGCaMP7b-WPRE was a gift from Douglas Kim & GENIE Project (Addgene plasmid # 104489; http://n2t.net/addgene:104489; RRID:Addgene_104489)) was transferred to lentiviral backbone by restriction enzyme digestion and ligation. pLenti-hSynI-TetON3G-WPRE: The DNA fragment of TetON3Gwas amplified from AAVS1-TRE3G-EGFP was a gift from Su-Chun Zhang (Addgene plasmid # 52343; http://n2t.net/addgene:52343; RRID:Addgene_52343) using following primers pair: 50-GTCGA Catgtctagactggacaagag-3’/50-ACGCGTttacccggggagcatgtcaa-3’. .. SYNGAP1 gRNA plasmid: DNA fragment of 50-TTAGCACATTGTCTACCCGG-30and 50- ACGGTACAGATGCAGCCGCA-30 were transferred to lentiCRISPR v2 plasmid by restriction enzyme digestion and ligation. lentiCRISPR v2 was a gift from Feng Zhang (Addgene plasmid # 52961; http://n2t.net/addgene:52961; RRID:Addgene_52961).

    Article Title: SYNGAP1 deficiency disrupts synaptic neoteny in xenotransplanted human cortical neurons in vivo
    Article Snippet: Human H9 embryonic stem cells (WiCell) were routinely propagated on mitotically inactivated mouse embryonic fibroblasts in Knockout DMEM (Thermo Fisher Scientific) supplemented with 20% Knockout Serum Replacement (Thermo Fisher Scientific), 1X Non-essential Amino Acids (Thermo Fisher Scientific), 1X Penicillin/Streptomycin (Thermo Fisher Scientific), 1X 2-Mercaptoethanol (Merck), 2mM L-glutamine (Thermo Fisher Scientific). .. pLenti-TRE3G-GCaMP7b-WPRE: The TRE3G fragment (pLenti CMVTRE3G eGFP Puro (w819-1) was a gift from Eric Campeau (Addgene plasmid # 27570; http://n2t.net/addgene:27570 ; RRID:Addgene_27570)) and the GCaMP7b fragment (pGP-AAV- syn -jGCaMP7b-WPRE was a gift from Douglas Kim & GENIE Project (Addgene plasmid # 104489; http://n2t.net/addgene:104489 ; RRID:Addgene_104489)) was transferred to lentiviral backbone by restriction enzyme digestion and ligation. pLenti-hSynI-TetON3G-WPRE: The DNA fragment of TetON3G was amplified from AAVS1-TRE3G-EGFP was a gift from Su-Chun Zhang (Addgene plasmid # 52343; http://n2t.net/addgene:52343 ; RRID:Addgene_52343) using following primers pair: 5′-GTCGACatgtctagactggacaagag-3’/5′-ACGCGTttacccggggagcatgtcaa-3’. ..

    Article Title: The PST repeat region of MDC1 is a tunable multivalent chromatin tethering domain
    Article Snippet: For lentiviral expression, the NLS-Reader1.0-eGFP was PCR amplified and cloned by Gibson assembly into AgeI- and EcoR1-linearized FUGW (a gift from David Baltimore (Addgene plasmid # 14883) . .. To knock-in inducible WT and T>A GFP-PST-LacI fusion proteins into the AAVS1 locus in U2OS 2-6-3 cells, we PCR amplified GFP and LacI from a GFP-LacI expression plasmid (a kind gift from Iain Cheeseman) 68 and codon-optimized WT and T>A PST repeat sequences and cloned them by Gibson assembly into MluI and SalI-linearized AAVS1-TRE3G-EGFP (a gift from Su-Chun Zhang (Addgene plasmid # 52343)) . .. The AAVS1-targeting gRNA plasmid, PX458-AAVS1, was a gift from Adam Karpf (Addgene plasmid # 113194).

    Article Title: AMPK regulates phagophore-to-autophagosome maturation.
    Article Snippet: .. Plasmid construction and genome editing The GFP-LC3B reporter was generated by cloning the coding sequences of LC3B into AAVS1-TRE3G-EGFP (AAVS1-TRE3GEGFP was a gift from Su-Chun Zhang; plasmid #52343; Addgene; https://n2t.net/addgene:52343; RRID:Addgene_52343) including a TEV-protease cleavage site separating EGFP and LC3B (Qian et al., 2014). .. GFP-tagged LC3 were stably expressed to parental HaloTagged cell lines (Halo-ATG2, Halo-ATG13, Halo-WIPI2, and ULK1-Halo) and Halo-ATG13 knockouts (ULK1 KO, ATG101 KO, FIP200 KO) by introducing the coding sequence at the AAVS1 safe-harbor locus (PPP1R12C) by cotransfection of the donor plasmid encoding tetracycline inducible GFP-LC3B and a plasmid encoding Cas9 and a sgRNA targeting the AAVS1 locus (AAVS1 T2 CRIPR in pX330 was a gift from Masato Kanemaki; plasmid #72833; Addgene; https://n2t.net/addgene:72833; RRID: Addgene_72833) (Natsume et al., 2016).

    Modification:

    Article Title: Splice modulators target PMS1 to reduce somatic expansion of the Huntington’s disease-associated CAG repeat
    Article Snippet: .. The AAVS1-TRE3G-EGFP (Addgene plasmid # 52343) plasmid was modified to insert the HTT exon 1 coding sequence using SalI restriction sites. ..

    Sequencing:

    Article Title: Splice modulators target PMS1 to reduce somatic expansion of the Huntington’s disease-associated CAG repeat
    Article Snippet: .. The AAVS1-TRE3G-EGFP (Addgene plasmid # 52343) plasmid was modified to insert the HTT exon 1 coding sequence using SalI restriction sites. ..

    Recombinant:

    Article Title: Generation and characterization of a human induced pluripotent stem cell line (hiPSC) expressing the rEstus voltage sensor under doxycycline induction.
    Article Snippet: .. Date archived/stock creation date 20.01.2025, p9 Cell line repository/bank https://hpscreg.eu/cell-line/UK Bi015-B-6 Ethics/GMO work approvals Ethics Committee, Medical Faculty, Rheinische Friedrich-WilhelmsUniversität (275/08) Disclaimers for Addgene/repositorysourced used recombinant DNA resources https://www.addgene.org/52341/, hAAVS1 TALEN Left was a gift from SuChun Zhang (Addgene plasmid # 52341; https://n2t.net/addgene:52341; RRID: Addgene_52341)https://www.addgene. org/52342/, hAAVS1 TALEN Right was a gift from Su-Chun Zhang (Addgene plasmid # 52342; https://n2t.net/addg ene:52342; RRID:Addgene_52342) https://www.addgene.org/52343/, AAVS1-TRE3G-EGFP was a gift from SuChun Zhang (Addgene plasmid # 52343; https://n2t.net/addgene:52343; RRID: Addgene_52343)https://www.addgene. org/209767/ rEstus (Addgene plasmid # 209767; https://n2t.net/addgene :209767; RRID:Addgene_209767) 1. ..

    Ligation:

    Article Title: SYNGAP1 deficiency disrupts synaptic neoteny in xenotransplanted human cortical neurons in vivo.
    Article Snippet: pLenti-TRE3G-GCaMP7b-WPRE: The TRE3G fragment (pLenti CMVTRE3G eGFP Puro (w819-1) was a gift from Eric Campeau (Addgene plasmid # 27570; http://n2t.net/addgene:27570; RRID:Addgene_27570)) and the GCaMP7b fragment (pGP-AAV-synjGCaMP7b-WPRE was a gift from Douglas Kim & GENIE Project (Addgene plasmid # 104489; http://n2t.net/addgene:104489; RRID:Addgene_104489)) was transferred to lentiviral backbone by restriction enzyme digestion and ligation. pLenti-hSynI-TetON3G-WPRE: The DNA fragment of TetON3Gwas amplified from AAVS1-TRE3G-EGFP was a gift from Su-Chun Zhang (Addgene plasmid # 52343; http://n2t.net/addgene:52343; RRID:Addgene_52343) using following primers pair: 50-GTCGA Catgtctagactggacaagag-3’/50-ACGCGTttacccggggagcatgtcaa-3’. .. pLenti-TRE3G-GCaMP7b-WPRE: The TRE3G fragment (pLenti CMVTRE3G eGFP Puro (w819-1) was a gift from Eric Campeau (Addgene plasmid # 27570; http://n2t.net/addgene:27570; RRID:Addgene_27570)) and the GCaMP7b fragment (pGP-AAV-synjGCaMP7b-WPRE was a gift from Douglas Kim & GENIE Project (Addgene plasmid # 104489; http://n2t.net/addgene:104489; RRID:Addgene_104489)) was transferred to lentiviral backbone by restriction enzyme digestion and ligation. pLenti-hSynI-TetON3G-WPRE: The DNA fragment of TetON3Gwas amplified from AAVS1-TRE3G-EGFP was a gift from Su-Chun Zhang (Addgene plasmid # 52343; http://n2t.net/addgene:52343; RRID:Addgene_52343) using following primers pair: 50-GTCGA Catgtctagactggacaagag-3’/50-ACGCGTttacccggggagcatgtcaa-3’. .. SYNGAP1 gRNA plasmid: DNA fragment of 50-TTAGCACATTGTCTACCCGG-30and 50- ACGGTACAGATGCAGCCGCA-30 were transferred to lentiCRISPR v2 plasmid by restriction enzyme digestion and ligation. lentiCRISPR v2 was a gift from Feng Zhang (Addgene plasmid # 52961; http://n2t.net/addgene:52961; RRID:Addgene_52961).

    Article Title: SYNGAP1 deficiency disrupts synaptic neoteny in xenotransplanted human cortical neurons in vivo
    Article Snippet: Human H9 embryonic stem cells (WiCell) were routinely propagated on mitotically inactivated mouse embryonic fibroblasts in Knockout DMEM (Thermo Fisher Scientific) supplemented with 20% Knockout Serum Replacement (Thermo Fisher Scientific), 1X Non-essential Amino Acids (Thermo Fisher Scientific), 1X Penicillin/Streptomycin (Thermo Fisher Scientific), 1X 2-Mercaptoethanol (Merck), 2mM L-glutamine (Thermo Fisher Scientific). .. pLenti-TRE3G-GCaMP7b-WPRE: The TRE3G fragment (pLenti CMVTRE3G eGFP Puro (w819-1) was a gift from Eric Campeau (Addgene plasmid # 27570; http://n2t.net/addgene:27570 ; RRID:Addgene_27570)) and the GCaMP7b fragment (pGP-AAV- syn -jGCaMP7b-WPRE was a gift from Douglas Kim & GENIE Project (Addgene plasmid # 104489; http://n2t.net/addgene:104489 ; RRID:Addgene_104489)) was transferred to lentiviral backbone by restriction enzyme digestion and ligation. pLenti-hSynI-TetON3G-WPRE: The DNA fragment of TetON3G was amplified from AAVS1-TRE3G-EGFP was a gift from Su-Chun Zhang (Addgene plasmid # 52343; http://n2t.net/addgene:52343 ; RRID:Addgene_52343) using following primers pair: 5′-GTCGACatgtctagactggacaagag-3’/5′-ACGCGTttacccggggagcatgtcaa-3’. ..

    Amplification:

    Article Title: SYNGAP1 deficiency disrupts synaptic neoteny in xenotransplanted human cortical neurons in vivo.
    Article Snippet: pLenti-TRE3G-GCaMP7b-WPRE: The TRE3G fragment (pLenti CMVTRE3G eGFP Puro (w819-1) was a gift from Eric Campeau (Addgene plasmid # 27570; http://n2t.net/addgene:27570; RRID:Addgene_27570)) and the GCaMP7b fragment (pGP-AAV-synjGCaMP7b-WPRE was a gift from Douglas Kim & GENIE Project (Addgene plasmid # 104489; http://n2t.net/addgene:104489; RRID:Addgene_104489)) was transferred to lentiviral backbone by restriction enzyme digestion and ligation. pLenti-hSynI-TetON3G-WPRE: The DNA fragment of TetON3Gwas amplified from AAVS1-TRE3G-EGFP was a gift from Su-Chun Zhang (Addgene plasmid # 52343; http://n2t.net/addgene:52343; RRID:Addgene_52343) using following primers pair: 50-GTCGA Catgtctagactggacaagag-3’/50-ACGCGTttacccggggagcatgtcaa-3’. .. pLenti-TRE3G-GCaMP7b-WPRE: The TRE3G fragment (pLenti CMVTRE3G eGFP Puro (w819-1) was a gift from Eric Campeau (Addgene plasmid # 27570; http://n2t.net/addgene:27570; RRID:Addgene_27570)) and the GCaMP7b fragment (pGP-AAV-synjGCaMP7b-WPRE was a gift from Douglas Kim & GENIE Project (Addgene plasmid # 104489; http://n2t.net/addgene:104489; RRID:Addgene_104489)) was transferred to lentiviral backbone by restriction enzyme digestion and ligation. pLenti-hSynI-TetON3G-WPRE: The DNA fragment of TetON3Gwas amplified from AAVS1-TRE3G-EGFP was a gift from Su-Chun Zhang (Addgene plasmid # 52343; http://n2t.net/addgene:52343; RRID:Addgene_52343) using following primers pair: 50-GTCGA Catgtctagactggacaagag-3’/50-ACGCGTttacccggggagcatgtcaa-3’. .. SYNGAP1 gRNA plasmid: DNA fragment of 50-TTAGCACATTGTCTACCCGG-30and 50- ACGGTACAGATGCAGCCGCA-30 were transferred to lentiCRISPR v2 plasmid by restriction enzyme digestion and ligation. lentiCRISPR v2 was a gift from Feng Zhang (Addgene plasmid # 52961; http://n2t.net/addgene:52961; RRID:Addgene_52961).

    Article Title: SYNGAP1 deficiency disrupts synaptic neoteny in xenotransplanted human cortical neurons in vivo
    Article Snippet: Human H9 embryonic stem cells (WiCell) were routinely propagated on mitotically inactivated mouse embryonic fibroblasts in Knockout DMEM (Thermo Fisher Scientific) supplemented with 20% Knockout Serum Replacement (Thermo Fisher Scientific), 1X Non-essential Amino Acids (Thermo Fisher Scientific), 1X Penicillin/Streptomycin (Thermo Fisher Scientific), 1X 2-Mercaptoethanol (Merck), 2mM L-glutamine (Thermo Fisher Scientific). .. pLenti-TRE3G-GCaMP7b-WPRE: The TRE3G fragment (pLenti CMVTRE3G eGFP Puro (w819-1) was a gift from Eric Campeau (Addgene plasmid # 27570; http://n2t.net/addgene:27570 ; RRID:Addgene_27570)) and the GCaMP7b fragment (pGP-AAV- syn -jGCaMP7b-WPRE was a gift from Douglas Kim & GENIE Project (Addgene plasmid # 104489; http://n2t.net/addgene:104489 ; RRID:Addgene_104489)) was transferred to lentiviral backbone by restriction enzyme digestion and ligation. pLenti-hSynI-TetON3G-WPRE: The DNA fragment of TetON3G was amplified from AAVS1-TRE3G-EGFP was a gift from Su-Chun Zhang (Addgene plasmid # 52343; http://n2t.net/addgene:52343 ; RRID:Addgene_52343) using following primers pair: 5′-GTCGACatgtctagactggacaagag-3’/5′-ACGCGTttacccggggagcatgtcaa-3’. ..

    Article Title: The PST repeat region of MDC1 is a tunable multivalent chromatin tethering domain
    Article Snippet: For lentiviral expression, the NLS-Reader1.0-eGFP was PCR amplified and cloned by Gibson assembly into AgeI- and EcoR1-linearized FUGW (a gift from David Baltimore (Addgene plasmid # 14883) . .. To knock-in inducible WT and T>A GFP-PST-LacI fusion proteins into the AAVS1 locus in U2OS 2-6-3 cells, we PCR amplified GFP and LacI from a GFP-LacI expression plasmid (a kind gift from Iain Cheeseman) 68 and codon-optimized WT and T>A PST repeat sequences and cloned them by Gibson assembly into MluI and SalI-linearized AAVS1-TRE3G-EGFP (a gift from Su-Chun Zhang (Addgene plasmid # 52343)) . .. The AAVS1-targeting gRNA plasmid, PX458-AAVS1, was a gift from Adam Karpf (Addgene plasmid # 113194).

    Knock-In:

    Article Title: The PST repeat region of MDC1 is a tunable multivalent chromatin tethering domain
    Article Snippet: For lentiviral expression, the NLS-Reader1.0-eGFP was PCR amplified and cloned by Gibson assembly into AgeI- and EcoR1-linearized FUGW (a gift from David Baltimore (Addgene plasmid # 14883) . .. To knock-in inducible WT and T>A GFP-PST-LacI fusion proteins into the AAVS1 locus in U2OS 2-6-3 cells, we PCR amplified GFP and LacI from a GFP-LacI expression plasmid (a kind gift from Iain Cheeseman) 68 and codon-optimized WT and T>A PST repeat sequences and cloned them by Gibson assembly into MluI and SalI-linearized AAVS1-TRE3G-EGFP (a gift from Su-Chun Zhang (Addgene plasmid # 52343)) . .. The AAVS1-targeting gRNA plasmid, PX458-AAVS1, was a gift from Adam Karpf (Addgene plasmid # 113194).

    Polymerase Chain Reaction:

    Article Title: The PST repeat region of MDC1 is a tunable multivalent chromatin tethering domain
    Article Snippet: For lentiviral expression, the NLS-Reader1.0-eGFP was PCR amplified and cloned by Gibson assembly into AgeI- and EcoR1-linearized FUGW (a gift from David Baltimore (Addgene plasmid # 14883) . .. To knock-in inducible WT and T>A GFP-PST-LacI fusion proteins into the AAVS1 locus in U2OS 2-6-3 cells, we PCR amplified GFP and LacI from a GFP-LacI expression plasmid (a kind gift from Iain Cheeseman) 68 and codon-optimized WT and T>A PST repeat sequences and cloned them by Gibson assembly into MluI and SalI-linearized AAVS1-TRE3G-EGFP (a gift from Su-Chun Zhang (Addgene plasmid # 52343)) . .. The AAVS1-targeting gRNA plasmid, PX458-AAVS1, was a gift from Adam Karpf (Addgene plasmid # 113194).

    Expressing:

    Article Title: The PST repeat region of MDC1 is a tunable multivalent chromatin tethering domain
    Article Snippet: For lentiviral expression, the NLS-Reader1.0-eGFP was PCR amplified and cloned by Gibson assembly into AgeI- and EcoR1-linearized FUGW (a gift from David Baltimore (Addgene plasmid # 14883) . .. To knock-in inducible WT and T>A GFP-PST-LacI fusion proteins into the AAVS1 locus in U2OS 2-6-3 cells, we PCR amplified GFP and LacI from a GFP-LacI expression plasmid (a kind gift from Iain Cheeseman) 68 and codon-optimized WT and T>A PST repeat sequences and cloned them by Gibson assembly into MluI and SalI-linearized AAVS1-TRE3G-EGFP (a gift from Su-Chun Zhang (Addgene plasmid # 52343)) . .. The AAVS1-targeting gRNA plasmid, PX458-AAVS1, was a gift from Adam Karpf (Addgene plasmid # 113194).

    Clone Assay:

    Article Title: The PST repeat region of MDC1 is a tunable multivalent chromatin tethering domain
    Article Snippet: For lentiviral expression, the NLS-Reader1.0-eGFP was PCR amplified and cloned by Gibson assembly into AgeI- and EcoR1-linearized FUGW (a gift from David Baltimore (Addgene plasmid # 14883) . .. To knock-in inducible WT and T>A GFP-PST-LacI fusion proteins into the AAVS1 locus in U2OS 2-6-3 cells, we PCR amplified GFP and LacI from a GFP-LacI expression plasmid (a kind gift from Iain Cheeseman) 68 and codon-optimized WT and T>A PST repeat sequences and cloned them by Gibson assembly into MluI and SalI-linearized AAVS1-TRE3G-EGFP (a gift from Su-Chun Zhang (Addgene plasmid # 52343)) . .. The AAVS1-targeting gRNA plasmid, PX458-AAVS1, was a gift from Adam Karpf (Addgene plasmid # 113194).

    Generated:

    Article Title: AMPK regulates phagophore-to-autophagosome maturation.
    Article Snippet: .. Plasmid construction and genome editing The GFP-LC3B reporter was generated by cloning the coding sequences of LC3B into AAVS1-TRE3G-EGFP (AAVS1-TRE3GEGFP was a gift from Su-Chun Zhang; plasmid #52343; Addgene; https://n2t.net/addgene:52343; RRID:Addgene_52343) including a TEV-protease cleavage site separating EGFP and LC3B (Qian et al., 2014). .. GFP-tagged LC3 were stably expressed to parental HaloTagged cell lines (Halo-ATG2, Halo-ATG13, Halo-WIPI2, and ULK1-Halo) and Halo-ATG13 knockouts (ULK1 KO, ATG101 KO, FIP200 KO) by introducing the coding sequence at the AAVS1 safe-harbor locus (PPP1R12C) by cotransfection of the donor plasmid encoding tetracycline inducible GFP-LC3B and a plasmid encoding Cas9 and a sgRNA targeting the AAVS1 locus (AAVS1 T2 CRIPR in pX330 was a gift from Masato Kanemaki; plasmid #72833; Addgene; https://n2t.net/addgene:72833; RRID: Addgene_72833) (Natsume et al., 2016).

    Cloning:

    Article Title: AMPK regulates phagophore-to-autophagosome maturation.
    Article Snippet: .. Plasmid construction and genome editing The GFP-LC3B reporter was generated by cloning the coding sequences of LC3B into AAVS1-TRE3G-EGFP (AAVS1-TRE3GEGFP was a gift from Su-Chun Zhang; plasmid #52343; Addgene; https://n2t.net/addgene:52343; RRID:Addgene_52343) including a TEV-protease cleavage site separating EGFP and LC3B (Qian et al., 2014). .. GFP-tagged LC3 were stably expressed to parental HaloTagged cell lines (Halo-ATG2, Halo-ATG13, Halo-WIPI2, and ULK1-Halo) and Halo-ATG13 knockouts (ULK1 KO, ATG101 KO, FIP200 KO) by introducing the coding sequence at the AAVS1 safe-harbor locus (PPP1R12C) by cotransfection of the donor plasmid encoding tetracycline inducible GFP-LC3B and a plasmid encoding Cas9 and a sgRNA targeting the AAVS1 locus (AAVS1 T2 CRIPR in pX330 was a gift from Masato Kanemaki; plasmid #72833; Addgene; https://n2t.net/addgene:72833; RRID: Addgene_72833) (Natsume et al., 2016).



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